Dcu_g12527 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : transcriptional regulator *(HsfA1) & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g12527

Target Alias Description ECC score Gene Family Method Actions
AT1G32330 ATHSFA1D, HSFA1D heat shock transcription factor A1D 0.03 OrthoFinder output from all 47 species
Als_g52565 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05885 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Lfl_g30505 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MpVg00470.1 HSFA1B, ATHSF3,... No annotation 0.03 OrthoFinder output from all 47 species
Pir_g36415 AT-HSFB2B, HSFB2B HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28359 No alias HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034782_P002 AT-HSFB2A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 27 116
No external refs found!