Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B
Description : transcriptional regulator *(HsfA1) & original description: none
Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G32330 | ATHSFA1D, HSFA1D | heat shock transcription factor A1D | 0.03 | OrthoFinder output from all 47 species | |
Als_g52565 | HSFA1B, ATHSF3,... | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_05885 | HSFB4, SCZ, AT-HSFB4 | transcription factor (HSF) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g30505 | HSFA1B, ATHSF3,... | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MpVg00470.1 | HSFA1B, ATHSF3,... | No annotation | 0.03 | OrthoFinder output from all 47 species | |
Pir_g36415 | AT-HSFB2B, HSFB2B | HSF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g28359 | No alias | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034782_P002 | AT-HSFB2A,... | transcription factor (HSF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 27 | 116 |
No external refs found! |