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  5. Dcu_g09668

Dcu_g09668 (UBP2, ATUBP2)


Aliases : UBP2, ATUBP2

Description : deubiquitinase *(UBP1-2) & original description: none


Gene families : OG0003367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09668

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00108940 UBP2, ATUBP2,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
AT1G04860 UBP2, ATUBP2 ubiquitin-specific protease 2 0.02 OrthoFinder output from all 47 species
AT2G32780 ATUBP1, UBP1 ubiquitin-specific protease 1 0.03 OrthoFinder output from all 47 species
Aev_g07996 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02672 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G005200.1 UBP2, ATUBP2,... deubiquitinase *(UBP1-2) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G074500.1 UBP2, ATUBP2,... deubiquitinase *(UBP1-2) & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g07960 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06210 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01021053001 UBP2, ATUBP2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os09g32740.1 UBP2, ATUBP2,... deubiquitinase (UBP1-2) 0.03 OrthoFinder output from all 47 species
Len_g12921 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.04 OrthoFinder output from all 47 species
MA_609805g0010 UBP2, ATUBP2 deubiquitinase (UBP1-2) 0.03 OrthoFinder output from all 47 species
Mp7g16560.1 UBP2, ATUBP2 deubiquitinase (UBP1-2) 0.02 OrthoFinder output from all 47 species
Ore_g37204 UBP2, ATUBP2 deubiquitinase *(UBP1-2) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g091930.3.1 UBP2, ATUBP2,... deubiquitinase (UBP1-2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 338 1346
IPR001607 Znf_UBP 179 248
No external refs found!