1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g09097

Dcu_g09097


Description : not classified & original description: none


Gene families : OG0008483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008483_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09097
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Adi_g018628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58266.t1 Aspi01Gene58266 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008132 No alias not classified & original description: CDS=109-1671 0.03 OrthoFinder output from all 47 species
Ceric.39G049100.1 Ceric.39G049100 not classified & original description: pacid=50583129... 0.08 OrthoFinder output from all 47 species
Ehy_g12315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014167 No alias not classified & original description: CDS=261-1784 0.04 OrthoFinder output from all 47 species
Sam_g10588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 218 396
IPR013848 Methylthiotransferase_N 74 172
IPR002792 TRAM_dom 452 513
No external refs found!