Aliases : DCAF1
Description : substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: none
Gene families : OG0003029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003029_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g08329 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00130610 | DCAF1,... | DDB1- and CUL4-associated factor homolog 1... | 0.06 | OrthoFinder output from all 47 species | |
AT4G31160 | DCAF1 | DDB1-CUL4 associated factor 1 | 0.08 | OrthoFinder output from all 47 species | |
Adi_g057733 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g24709 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g12806 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g32145 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Als_g18069 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Als_g30310 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g13741 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g09039 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27054 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene58042.t1 | DCAF1, Aspi01Gene58042 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0006.g009764 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g10373 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g30023 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G079100.1 | DCAF1, Ceric.04G079100 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.12G050900.1 | DCAF1, Ceric.12G050900 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Cre17.g725450 | DCAF1 | DDB1- and CUL4-associated factor homolog 1... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g15070 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g39976 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g05393 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g08698 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g21800 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01035587001 | DCAF1 | DDB1- and CUL4-associated factor homolog 1... | 0.05 | OrthoFinder output from all 47 species | |
Gb_32239 | DCAF1 | DDB1- and CUL4-associated factor homolog 1... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os04g59460.1 | DCAF1, LOC_Os04g59460 | DDB1- and CUL4-associated factor homolog 1... | 0.09 | OrthoFinder output from all 47 species | |
Len_g10330 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g05760 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.1 | OrthoFinder output from all 47 species | |
MA_10435370g0020 | DCAF1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g04090.1 | DCAF1 | DDB1- and CUL4-associated factor homolog 1... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g24093 | DCAF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g36728 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.08 | OrthoFinder output from all 47 species | |
Nbi_g18130 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g27254 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.09 | OrthoFinder output from all 47 species | |
Ore_g40504 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.12 | OrthoFinder output from all 47 species | |
Pir_g07568 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g10473 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24113 | DCAF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g15307 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g17435 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g18002 | No alias | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g074370.4.1 | DCAF1, Solyc08g074370 | DDB1- and CUL4-associated factor homolog 1... | 0.11 | OrthoFinder output from all 47 species | |
Spa_g18282 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.08 | OrthoFinder output from all 47 species | |
Spa_g41401 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07661 | DCAF1 | substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquiTin... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e007504_P002 | DCAF1, Zm00001e007504 | DDB1- and CUL4-associated factor homolog 1... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e042002_P001 | DCAF1, Zm00001e042002 | DDB1- and CUL4-associated factor homolog 1... | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |