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  5. Dcu_g07463

Dcu_g07463


Description : methionine-tRNA ligase & original description: none


Gene families : OG0005969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07463

Target Alias Description ECC score Gene Family Method Actions
AT2G40660 No alias Nucleic acid-binding, OB-fold-like protein 0.06 OrthoFinder output from all 47 species
Als_g21597 No alias methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G059700.1 Ceric.34G059700 methionine-tRNA ligase & original description:... 0.03 OrthoFinder output from all 47 species
Cre03.g145967 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
GSVIVT01032669001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
LOC_Os01g60660.1 LOC_Os01g60660 methionine-tRNA ligase 0.07 OrthoFinder output from all 47 species
Solyc06g048610.3.1 Solyc06g048610 methionine-tRNA ligase 0.07 OrthoFinder output from all 47 species
Spa_g10272 No alias methionine-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03966 No alias methionine-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028847_P003 Zm00001e028847 methionine-tRNA ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 222 316
No external refs found!