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  5. Dcu_g06375

Dcu_g06375


Description : translation termination factor *(eRF3) & original description: none


Gene families : OG0004213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06375

Target Alias Description ECC score Gene Family Method Actions
Aev_g06694 No alias translation termination factor *(eRF3) & original... 0.04 OrthoFinder output from all 47 species
Als_g57305 No alias translation termination factor *(eRF3) & original... 0.02 OrthoFinder output from all 47 species
Aob_g04268 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Aop_g21103 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.02 OrthoFinder output from all 47 species
GSVIVT01008382001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g20220.1 LOC_Os04g20220 eRF3 peptide release factor 0.03 OrthoFinder output from all 47 species
Len_g35299 No alias translation termination factor *(eRF3) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g34425 No alias translation termination factor *(eRF3) & original... 0.05 OrthoFinder output from all 47 species
MA_10429223g0010 No alias Elongation factor 1-alpha OS=Vicia faba... 0.02 OrthoFinder output from all 47 species
Mp1g00820.1 No alias eRF3 peptide release factor 0.02 OrthoFinder output from all 47 species
Pir_g16691 No alias translation termination factor *(eRF3) & original... 0.02 OrthoFinder output from all 47 species
Smo115313 No alias Protein biosynthesis.translation termination.eRF3... 0.04 OrthoFinder output from all 47 species
Spa_g00747 No alias translation termination factor *(eRF3) & original... 0.07 OrthoFinder output from all 47 species
Tin_g11299 No alias translation termination factor *(eRF3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e040640_P002 Zm00001e040640 eRF3 peptide release factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 166 379
IPR004160 Transl_elong_EFTu/EF1A_C 482 593
IPR004161 EFTu-like_2 410 476
No external refs found!