Aliases : PTAC4, VIPP1
Description : protein involved in plastid membrane fusion *(VIPP) & original description: none
Gene families : OG0002497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002497_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g03592 | |
Cluster | HCCA: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00198600 | PTAC4, VIPP1,... | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
AT1G65260 | PTAC4, VIPP1 | plastid transcriptionally active 4 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g016621 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.05 | OrthoFinder output from all 47 species | |
Adi_g019901 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g12997 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.05 | OrthoFinder output from all 47 species | |
Als_g03586 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.05 | OrthoFinder output from all 47 species | |
Als_g21262 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g05137 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g06622 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g01210 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g01641 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0064.g035535 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0318.g064402 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g09434 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.21G054600.1 | PTAC4, VIPP1,... | protein involved in plastid membrane fusion *(VIPP) &... | 0.14 | OrthoFinder output from all 47 species | |
Ceric.25G000800.1 | PTAC4, VIPP1,... | protein involved in plastid membrane fusion *(VIPP) &... | 0.08 | OrthoFinder output from all 47 species | |
Cre13.g583550 | PTAC4, VIPP1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03283 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.08 | OrthoFinder output from all 47 species | |
Dde_g07895 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01019065001 | PTAC4, VIPP1 | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01038103001 | PTAC4, VIPP1 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g67000.1 | PTAC4, VIPP1,... | VIPP protein involved in plastid membrane fusion | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g01479 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g38402 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.07 | OrthoFinder output from all 47 species | |
MA_503650g0010 | PTAC4, VIPP1 | VIPP protein involved in plastid membrane fusion | 0.02 | OrthoFinder output from all 47 species | |
Msp_g08193 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g07063 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g16052 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g02210 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10062 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0003.g001918 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g37496 | No alias | protein involved in plastid membrane fusion *(VIPP) &... | 0.02 | OrthoFinder output from all 47 species | |
Smo93752 | PTAC4, VIPP1 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g008990.2.1 | PTAC4, VIPP1,... | VIPP protein involved in plastid membrane fusion | 0.05 | OrthoFinder output from all 47 species | |
Spa_g11958 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g13395 | PTAC4, VIPP1 | protein involved in plastid membrane fusion *(VIPP) &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018980_P001 | PTAC4, VIPP1,... | VIPP protein involved in plastid membrane fusion | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e028569_P001 | PTAC4, VIPP1,... | VIPP protein involved in plastid membrane fusion | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004325 | ferrochelatase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0006783 | heme biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035596 | methylthiotransferase activity | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0042168 | heme metabolic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0050497 | alkylthioltransferase activity | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007157 | PspA_IM30 | 77 | 289 |
No external refs found! |