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Description : component *(uL10c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g03520 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00218670 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G13510 | No alias | Ribosomal protein L10 family protein | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g00872 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04789 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g52226 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Aob_g00810 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g05054 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G078900.1 | Ceric.20G078900 | component *(uL10c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020516.18 | No alias | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g272850 | No alias | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g03164 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g00714 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032650001 | No alias | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21730 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g17580.1 | LOC_Os03g17580 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Len_g13372 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g00434 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| MA_483364g0010 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g07300.1 | No alias | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g00974 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00675 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Ore_g19831 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g30194 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11548 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c1_1330V3.1 | Pp3c1_1330 | Ribosomal protein L10 family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54796 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Smo233811 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g009540.1.1 | Solyc04g009540 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g24954 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g00512 | No alias | component *(uL10c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e001284_P001 | Zm00001e001284 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e038440_P001 | Zm00001e038440 | component mtRPL10|psRPL10 of large ribosomal subunit... | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001790 | Ribosomal_L10P | 45 | 131 |
| No external refs found! |