1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g03176

Dcu_g03176 (MRL1)


Aliases : MRL1

Description : rbcL-mRNA stability factor *(MRL1) & original description: none


Gene families : OG0004421 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004421_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03176
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00357p00011320 MRL1,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00451p00003410 MRL1,... Pentatricopeptide repeat-containing protein MRL1,... 0.02 OrthoFinder output from all 47 species
AT4G34830 MRL1 Pentatricopeptide repeat (PPR) superfamily protein 0.09 OrthoFinder output from all 47 species
Aev_g07991 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16036 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g02579 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03622 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g02698 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.28G061200.1 Ceric.28G061200 rbcL-mRNA stability factor *(MRL1) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12659 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21513 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10337 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01024119001 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.06 OrthoFinder output from all 47 species
Gb_33501 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.08 OrthoFinder output from all 47 species
LOC_Os10g10170.1 MRL1, LOC_Os10g10170 Pentatricopeptide repeat-containing protein MRL1,... 0.05 OrthoFinder output from all 47 species
Lfl_g02395 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10429571g0010 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.05 OrthoFinder output from all 47 species
MA_122602g0010 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Mp3g17160.1 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species
Nbi_g03133 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08612 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17500 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02350 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003951 No alias rbcL-mRNA stability factor *(MRL1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g12546 No alias rbcL-mRNA stability factor *(MRL1) & original description: none 0.05 OrthoFinder output from all 47 species
Smo115078 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.02 OrthoFinder output from all 47 species
Smo169254 MRL1 Pentatricopeptide repeat-containing protein MRL1,... 0.04 OrthoFinder output from all 47 species
Solyc01g111020.3.1 MRL1, Solyc01g111020 Pentatricopeptide repeat-containing protein MRL1,... 0.07 OrthoFinder output from all 47 species
Spa_g01352 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02143 MRL1 rbcL-mRNA stability factor *(MRL1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002719_P003 MRL1, Zm00001e002719 Pentatricopeptide repeat-containing protein MRL1,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 651 799
IPR033443 PPR_long 504 636
IPR002885 Pentatricopeptide_repeat 820 850
No external refs found!