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  5. Dcu_g03080

Dcu_g03080 (V157, PDE166, ALB1,...)


Aliases : V157, PDE166, ALB1, CHLD, ALB-1V

Description : EC_6.6 ligase forming nitrogen-metal bond & original description: none


Gene families : OG0005530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03080
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00152680 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
AT1G08520 V157, PDE166,... ALBINA 1 0.03 OrthoFinder output from all 47 species
Ceric.13G055900.1 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001537.12 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Cre05.g242000 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
GSVIVT01002904001 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza... 0.05 OrthoFinder output from all 47 species
LOC_Os03g59640.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.02 OrthoFinder output from all 47 species
Lfl_g04202 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
MA_10428524g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_173818g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp6g04260.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.03 OrthoFinder output from all 47 species
Nbi_g13327 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g01370 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ppi_g56909 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Smo174616 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Solyc04g015490.4.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 543 648
IPR000523 Mg_chelatse_chII-like_cat_dom 71 255
IPR041628 ChlI/MoxR_AAA_lid 332 396
No external refs found!