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  5. Aev_g24720

Aev_g24720


Description : component *(U11-48K) of U11 snRNP complex & original description: none


Gene families : OG0006105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g24720

Target Alias Description ECC score Gene Family Method Actions
AT3G04160 No alias unknown protein; Has 1711 Blast hits to 1353 proteins in... 0.03 OrthoFinder output from all 47 species
Als_g05722 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g13397 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G015800.1 Ceric.12G015800 component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g20334 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01026370001 No alias RNA processing.RNA splicing.U12-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Gb_01181 No alias protein factor U11-48K of U11 small nuclear... 0.01 OrthoFinder output from all 47 species
LOC_Os04g28170.1 LOC_Os04g28170 protein factor U11-48K of U11 small nuclear... 0.03 OrthoFinder output from all 47 species
Mp1g20950.1 No alias protein factor U11-48K of U11 small nuclear... 0.02 OrthoFinder output from all 47 species
Msp_g31273 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g25297 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g18877 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Solyc04g050760.4.1 Solyc04g050760 protein factor U11-48K of U11 small nuclear... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!