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  5. Spa_g57287

Spa_g57287


Description : component *(MAC5) of non-snRNP MOS4-associated complex & original description: none


Gene families : OG0002868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g57287
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G07360 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.02 OrthoFinder output from all 47 species
AT2G29580 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.02 OrthoFinder output from all 47 species
Aev_g07760 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.02 OrthoFinder output from all 47 species
Ala_g03837 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Aob_g03209 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.04 OrthoFinder output from all 47 species
Aop_g26898 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene26681.t1 Aspi01Gene26681 component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Cba_g01090 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Cre02.g075650 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07350.1 LOC_Os06g07350 C3H zinc finger transcription factor. component MAC5 of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g18050.1 LOC_Os07g18050 C3H zinc finger transcription factor. component MAC5 of... 0.03 OrthoFinder output from all 47 species
MA_19607g0010 No alias C3H zinc finger transcription factor. component MAC5 of... 0.02 OrthoFinder output from all 47 species
Nbi_g14693 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.06 OrthoFinder output from all 47 species
Sam_g07647 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Solyc10g079190.3.1 Solyc10g079190 C3H zinc finger transcription factor. component MAC5 of... 0.03 OrthoFinder output from all 47 species
Tin_g11289 No alias component *(MAC5) of non-snRNP MOS4-associated complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e036386_P001 Zm00001e036386 C3H zinc finger transcription factor. component MAC5 of... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004140 dephospho-CoA kinase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032297 Torus 137 194
IPR000504 RRM_dom 230 288
No external refs found!