Spa_g54337


Description : not classified & original description: none


Gene families : OG0002898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54337

Target Alias Description ECC score Gene Family Method Actions
Als_g16114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G053300.1 Ceric.10G053300 not classified & original description: pacid=50613105... 0.05 OrthoFinder output from all 47 species
Ceric.13G081400.1 Ceric.13G081400 not classified & original description: pacid=50635650... 0.02 OrthoFinder output from all 47 species
Dac_g21055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021977 No alias not classified & original description: CDS=1-1806 0.04 OrthoFinder output from all 47 species
Smo407447 COPT5 Nutrient uptake.copper uptake.reduction-based... 0.03 OrthoFinder output from all 47 species
Tin_g08710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007592 GEBP 343 443
No external refs found!