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  4. Sequence
  5. Spa_g52248

Spa_g52248


Description : not classified & original description: none


Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g52248
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Ala_g31776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28399.t1 Aspi01Gene28399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51088.t1 Aspi01Gene51088 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072050 LNG1 not classified & original description: CDS=221-3385 0.03 OrthoFinder output from all 47 species
Cba_g12245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G024800.1 Ceric.01G024800 not classified & original description: pacid=50592459... 0.04 OrthoFinder output from all 47 species
Ceric.13G047000.1 Ceric.13G047000 not classified & original description: pacid=50636886... 0.05 OrthoFinder output from all 47 species
Dac_g07034 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g12189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g47224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433891g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g18360.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g14650.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g14870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15321 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014888 No alias not classified & original description: CDS=1-3741 0.03 OrthoFinder output from all 47 species
Sam_g09091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55806 LNG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12819 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025486 DUF4378 449 604
No external refs found!