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Aliases : CYCA3;1
Description : not classified & original description: none
Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g43416 | |
| Cluster | HCCA: Cluster_138 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00032080 | CYCB2;3,... | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00101p00131830 | CYCB1;1, CYCB1,... | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| AT1G76310 | CYCB2;4 | CYCLIN B2;4 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G17620 | CYCB2;1 | Cyclin B2;1 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G26760 | CYCB1;4 | Cyclin B1;4 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G11520 | CYCB1;3, CYC2 | CYCLIN B1;3 | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15872 | CYCB1;2, CYC1BAT | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16595 | CYCB2;3 | regulatory protein *(CYCB) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07135 | CYCB2;4 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0230.g059168 | CYCB2;4 | not classified & original description: CDS=1-1479 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G046300.1 | CYCB2;3, Ceric.06G046300 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G071600.1 | CYCB2;3, Ceric.18G071600 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G047800.1 | CYCB2;3, Ceric.21G047800 | regulatory protein *(CYCB) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G002300.1 | CYCB2;3, Ceric.26G002300 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G034200.1 | CYCB2;3, Ceric.31G034200 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000769.38 | CYCB2;1 | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021312.11 | CYCB2;2 | G2/mitotic-specific cyclin S13-6 OS=Glycine max | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g17049 | CYCB2;4 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009895001 | CYCB2;3 | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025781001 | CYCB1;2, CYC1BAT | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036739001 | CYCB3;1 | Cell cycle.regulation.cyclins.CYCB-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| Gb_01761 | CYCB3;1 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03506 | CYCB1;4 | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10664 | CYCB2;3 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g59120.1 | CYCB1;2,... | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g47580.1 | CYCB2;3, LOC_Os04g47580 | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g41390.1 | CYCB1;2,... | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g51110.2 | CYCB2;3, LOC_Os06g51110 | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56071 | CYCB2;3 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25818 | CYCB2;3 | regulatory protein *(CYCB) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428837g0030 | CYCB1;3, CYC2 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433093g0020 | CYCB2;3 | Cyclin-B2-1 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| MA_127335g0010 | CYCB2;3 | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_855375g0010 | CYCB2;3 | Cyclin-B2-1 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g00590.1 | CYCB2;3 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g10030.1 | CYCB2;2 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g42899 | CYCB2;4 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03000 | CYCB2;3 | regulatory protein *(CYCB) of cell cycle & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16342 | No alias | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g032190.3.1 | CYCB2;3, Solyc03g032190 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23146 | CYCB2;3 | regulatory protein *(CYCB) of cell cycle & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028899_P002 | CYCB1;2,... | cyclin (CYCB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041485_P001 | CYCB2;3, Zm00001e041485 | cyclin (CYCB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |