Description : EC_5.2 cis-trans-isomerase & original description: none
Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g41136 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g02933 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g06025 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g11199 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g13234 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g08725 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G091900.1 | Ceric.01G091900 | EC_5.2 cis-trans-isomerase & original description:... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.21G017200.1 | Ceric.21G017200 | EC_5.2 cis-trans-isomerase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000217.30 | ROC5, ATCYP1 | Protein modification.protein folding and quality... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000459.94 | ROC5, ATCYP1 | Protein modification.protein folding and quality... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001636.9 | CYP5, ATCYP5, CYP19-4 | Protein modification.protein folding and quality... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g08435 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g09101 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g10578 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g06988 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13678 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g18237 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c1_32280V3.1 | ROC3, Pp3c1_32280 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase... | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0217.g026071 | No alias | EC_5.2 cis-trans-isomerase & original description: CDS=293-1030 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07188 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g51571 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo229229 | ATCYP20-2, CYP20-2 | Protein modification.protein folding and quality... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g19382 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEA | Interproscan |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | HCCA |
BP | GO:0009245 | lipid A biosynthetic process | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
MF | GO:0019213 | deacetylase activity | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
BP | GO:0046493 | lipid A metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
CC | GO:0070939 | Dsl1/NZR complex | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | HCCA |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002130 | Cyclophilin-type_PPIase_dom | 28 | 192 |
No external refs found! |