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  5. Spa_g40885

Spa_g40885 (TMN1, AtTMN1)


Aliases : TMN1, AtTMN1

Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00070p00145350 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G08350 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.07 OrthoFinder output from all 47 species
AT1G14670 No alias Endomembrane protein 70 protein family 0.05 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
Adi_g002017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041686 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27302 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03467 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03806 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0428.g069304 No alias not classified & original description: CDS=237-1763 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.04 OrthoFinder output from all 47 species
Cba_g26284 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G022200.1 Ceric.01G022200 not classified & original description: pacid=50590564... 0.04 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.06 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.04 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.14 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.15 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dac_g03775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08970 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24030 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01026057001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_07212 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g13380.1 LOC_Os03g13380 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
LOC_Os08g06470.1 LOC_Os08g06470 Transmembrane 9 superfamily member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g02350.1 LOC_Os10g02350 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45907 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06433 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10846 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo163520 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo166118 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g103930.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc10g044480.2.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Tin_g04605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14792 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000978_P002 Zm00001e000978 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e008994_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014799_P002 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038626_P002 Zm00001e038626 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 5 130
No external refs found!