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  5. Spa_g36079

Spa_g36079 (RCI1, GRF3)


Aliases : RCI1, GRF3

Description : 14-3-3 phosphoprotein-binding protein *(GRF) & original description: none


Gene families : OG0000206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g36079

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00201030 GRF12, GF14... 14-3-3-like protein D OS=Glycine max 0.02 OrthoFinder output from all 47 species
AT2G42590 GRF9, GF14 MU general regulatory factor 9 0.03 OrthoFinder output from all 47 species
AT4G09000 GRF1, GF14 CHI general regulatory factor 1 0.02 OrthoFinder output from all 47 species
Als_g47176 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g30342 RCI1, GRF3 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.07 OrthoFinder output from all 47 species
LOC_Os08g33370.2 GF14 NU, GRF7,... 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Ppi_g51117 GRF10, GF14... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50858 No alias 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Spa_g40484 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023410 14-3-3_domain 10 235
No external refs found!