Description : not classified & original description: none
Gene families : OG0003481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003481_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g010871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020592.36 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02947 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01012211001 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.02 | OrthoFinder output from all 47 species | |
Gb_21554 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g40800.1 | LOC_Os07g40800 | Pentatricopeptide repeat-containing protein At1g26460,... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436610g0010 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g25580.1 | No alias | Pentatricopeptide repeat-containing protein At1g26460,... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0093.g019038 | No alias | not classified & original description: CDS=213-2159 | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010701_P001 | Zm00001e010701 | Pentatricopeptide repeat-containing protein At1g26460,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035476_P002 | Zm00001e035476 | Pentatricopeptide repeat-containing protein At1g26460,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 550 | 596 |
No external refs found! |