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  5. Spa_g22190

Spa_g22190


Description : ribonuclease *(RNC1) & original description: none


Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22190
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT4G37510 No alias Ribonuclease III family protein 0.04 OrthoFinder output from all 47 species
Ceric.37G005400.1 Ceric.37G005400 ribonuclease *(RNC1) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g30224 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g59510.1 LOC_Os01g59510 ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
MA_10436489g0010 No alias ribonuclease (RNC1) 0.03 OrthoFinder output from all 47 species
Mp1g04540.1 No alias ribonuclease (RNC1) 0.07 OrthoFinder output from all 47 species
Nbi_g17999 No alias ribonuclease *(RNC1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18587 No alias ribonuclease *(RNC1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13115 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g080040.3.1 Solyc10g080040 ribonuclease (RNC1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!