Aliases : TIC40, ATTIC40, PDE120
Description : component *(Tic40) of inner envelope TIC translocation system & original description: none
Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00175860 | TIC40, ATTIC40,... | Protein translocation.chloroplast.inner envelope TIC... | 0.05 | OrthoFinder output from all 47 species | |
AT5G16620 | TIC40, ATTIC40, PDE120 | hydroxyproline-rich glycoprotein family protein | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0109.g045418 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G014600.1 | TIC40, ATTIC40,... | component *(Tic40) of inner envelope TIC translocation... | 0.09 | OrthoFinder output from all 47 species | |
Cre12.g508000 | TIC40, ATTIC40, PDE120 | Protein translocation.chloroplast.inner envelope TIC... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02550 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g35900.1 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.02 | OrthoFinder output from all 47 species | |
MA_10433034g0010 | TIC40, ATTIC40, PDE120 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp3g00830.1 | TIC40, ATTIC40, PDE120 | component Tic40 of inner envelope TIC translocation system | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0187.g025125 | TIC40, ATTIC40, PDE120 | component *(Tic40) of inner envelope TIC translocation... | 0.03 | OrthoFinder output from all 47 species | |
Smo437721 | TIC40, ATTIC40, PDE120 | Protein translocation.chloroplast.inner envelope TIC... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g020300.2.1 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008048_P001 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e040911_P002 | TIC40, ATTIC40,... | component Tic40 of inner envelope TIC translocation system | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR041243 | STI1/HOP_DP | 380 | 431 |
No external refs found! |