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  5. Spa_g16372

Spa_g16372 (PBG1)


Aliases : PBG1

Description : beta-type-7 component *(PBG) of 26S proteasome & original description: none


Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16372
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00154550 PBG1,... Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
AT1G56450 PBG1 20S proteasome beta subunit G1 0.08 OrthoFinder output from all 47 species
Adi_g007501 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Aev_g44777 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aob_g00901 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g04985 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Azfi_s0350.g066539 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cba_g16284 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000808.43 PBG1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Cre06.g280850 PBG1 Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder output from all 47 species
Dac_g00589 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Dcu_g02600 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g21621 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ehy_g26230 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01025150001 PBG1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Gb_09437 PBG1 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
LOC_Os09g33986.1 PBG1, LOC_Os09g33986 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
MA_10427481g0010 PBG1 component beta type-7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp6g01810.1 PBG1 component beta type-7 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Nbi_g04663 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ore_g20507 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pir_g00404 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Smo271646 PBG1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc11g069150.3.1 PBG1, Solyc11g069150 component beta type-7 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Tin_g06402 PBG1 beta-type-7 component *(PBG) of 26S proteasome &... 0.1 OrthoFinder output from all 47 species
Zm00001e010160_P002 PBG1, Zm00001e010160 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e034696_P001 PBG1, Zm00001e034696 component beta type-7 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 39 220
No external refs found!