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  5. Spa_g16350

Spa_g16350


Description : not classified & original description: none


Gene families : OG0007415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16350
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Ala_g06577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21352 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ceric.12G034500.1 Ceric.12G034500 not classified & original description: pacid=50602319... 0.07 OrthoFinder output from all 47 species
Dac_g22447 WIN2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g26608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24778 WIN2 Probable protein phosphatase 2C 45 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Len_g22500 WIN2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g17032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07197 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g18580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c7_120V3.1 WIN2, Pp3c7_120 Protein phosphatase 2C family protein 0.01 OrthoFinder output from all 47 species
Ppi_g07444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 96 347
No external refs found!