Spa_g16041 (emb2738)

Aliases : emb2738

Description : not classified & original description: none

Gene families : OG0006217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006217_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g16041
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AT3G12080	emb2738	GTP-binding family protein	0.03	OrthoFinder output from all 47 species
Adi_g055754	emb2738	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g64838	emb2738	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Mp3g03840.1	emb2738	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ore_g31254	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g25600	emb2738	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59771	emb2738	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc11g065870.3.1	emb2738, Solyc11g065870	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e011327_P001	emb2738, Zm00001e011327	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR045063	Dynamin_N	37	89
IPR006073	GTP-bd	144	291
IPR006073	GTP-bd	353	474
IPR032859	KH_dom-like	533	614

External Links

No external refs found!