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  5. Spa_g13780

Spa_g13780 (ATHB21, HB21, HB-2)


Aliases : ATHB21, HB21, HB-2

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13780
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT2G22430 HB6, ATHB6 homeobox protein 6 0.03 OrthoFinder output from all 47 species
Ala_g33628 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60040.t1 ATHB3, HB-3,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g08070 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g08571 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Lfl_g23117 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g02929 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g15485 ATHB13 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Solyc05g006980.3.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Spa_g55691 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e002803_P001 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 103 156
No external refs found!