Heatmap: Cluster_9 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
-1.41 - 2.19 - - -2.83 -3.01 1.45 -0.68 0.53
0.74 -5.2 1.55 -1.49 -2.94 -1.23 -3.25 1.31 -1.35 0.56
0.44 -7.04 1.76 -0.63 -2.3 -1.31 -4.07 1.17 -3.88 0.69
Spa_g00414 (ENT3)
-0.36 -0.72 1.06 -0.17 -0.78 -0.19 -0.75 0.47 -0.28 0.46
Spa_g00437 (CDC45)
0.28 - 1.25 - - -6.67 -6.64 2.36 -8.23 0.34
- -1.84 2.31 -3.42 -2.84 -1.9 -4.29 1.25 -0.77 0.33
0.5 -2.79 0.91 -0.73 -2.18 -1.29 -2.04 1.45 0.38 0.07
Spa_g00763 (PLD)
-1.08 0.45 1.7 -3.73 -2.18 -2.66 -2.69 1.66 -0.06 -2.33
1.61 -5.92 1.96 -4.14 - -5.73 -4.96 0.9 -4.28 0.03
-0.09 -3.64 1.44 -3.87 - -3.65 -1.85 2.0 -2.84 0.77
-1.05 -0.36 2.14 -0.61 -2.28 -1.16 -2.52 0.94 -1.73 -0.66
Spa_g01167 (ROPGEF1)
0.13 -3.01 2.2 -5.31 - -5.45 -4.73 1.8 -3.86 -0.84
0.09 - 1.5 - - - - 2.41 - -0.33
1.16 -3.92 1.8 -4.03 - -3.99 - 1.12 -0.8 0.44
-4.93 -1.03 2.02 -2.26 -4.26 -2.47 -2.1 1.39 -1.47 0.82
0.15 -1.06 1.56 -1.2 -1.75 -1.33 -1.64 1.33 -0.98 -0.01
0.58 -1.0 1.32 -1.22 -2.1 -2.67 -2.99 1.23 -0.27 0.48
Spa_g01518 (UGT85A7)
-1.93 -6.49 1.79 -0.77 -2.31 -1.03 -3.12 1.46 -1.31 0.78
-0.21 -0.21 1.39 -3.44 -3.4 -2.11 -2.62 2.05 -0.18 -4.0
Spa_g01666 (LOG1)
-0.28 -2.3 1.14 -6.12 -5.96 -7.84 -6.92 1.92 0.25 0.8
0.26 -1.59 1.13 -2.36 -1.32 -2.17 -1.37 1.7 -0.74 0.31
1.02 - 0.35 - -1.4 - - 2.22 - 0.74
-5.74 -3.36 1.56 -5.77 -2.45 - -4.16 2.45 0.14 -3.17
-1.24 -0.35 1.18 -3.4 -1.09 -1.76 - 2.07 -0.42 -0.47
Spa_g02568 (ATK5)
0.69 - 1.41 -6.09 - - - 1.58 -4.3 1.43
-2.73 -1.12 1.8 -1.46 -0.27 -1.4 -0.27 0.88 -0.92 0.18
0.74 -2.37 1.43 - -1.56 -3.3 -1.42 1.39 -0.12 0.13
0.85 - 1.51 - - -4.78 - 1.69 -4.96 1.03
- - 2.61 - - - - 1.96 - -
Spa_g04016 (SCE1)
1.1 -4.92 1.73 -3.16 - -1.54 -5.14 0.94 -2.79 0.97
Spa_g04207 (EB1A)
0.99 -5.2 1.68 -1.95 -2.75 -2.6 -2.91 1.15 -1.38 0.55
-0.55 -1.77 1.67 -2.04 -1.62 -3.2 -1.69 1.66 -1.24 0.35
0.44 -2.63 1.14 -1.34 -0.9 -0.89 -0.56 1.03 -0.46 0.44
-0.64 -1.13 1.17 -0.77 -0.8 -0.76 -0.71 1.23 0.12 -0.24
-0.81 -2.76 1.14 -1.02 -2.72 -1.12 -1.89 1.56 0.55 0.37
Spa_g04694 (ZCF125)
1.13 -2.66 1.45 -1.11 -3.52 -1.46 -3.9 1.37 -3.72 0.36
-0.84 -4.59 2.12 -5.54 -3.75 -5.45 -3.12 1.51 -0.82 0.49
0.21 -1.66 1.6 -2.32 -2.69 -2.85 -2.78 1.63 -0.8 0.23
-1.75 -0.94 0.78 -1.33 -0.18 -1.44 0.1 1.37 0.01 0.2
0.72 -1.57 1.17 -1.3 -1.29 -1.04 -0.78 0.79 -0.23 0.39
-2.13 - 2.48 - -4.47 -6.16 -2.65 1.68 -2.85 -0.62
-5.82 -1.4 2.43 -3.28 -3.41 -3.42 -4.8 1.75 -2.31 -1.65
0.48 -4.48 2.07 -3.67 -4.14 -4.2 -3.85 1.25 -4.24 0.75
-2.18 -5.35 2.39 -5.64 -6.69 -5.37 -5.01 1.76 -1.35 -0.6
Spa_g06063 (BUB3.2)
0.36 -1.26 0.62 -0.81 -0.79 -0.82 -0.43 1.03 0.27 0.08
Spa_g06106 (LAS)
-0.61 -3.22 1.49 -3.09 -1.76 -2.31 -2.26 1.67 -0.63 0.83
Spa_g06408 (TKI1)
-0.07 -0.34 0.74 -0.45 -0.15 -0.39 -0.24 0.56 -0.07 -0.11
-0.23 - 1.81 - - - - 2.16 -3.86 0.14
0.33 - 0.49 -0.63 -1.12 -0.51 -3.13 1.97 -0.12 -0.81
0.82 -2.76 1.43 -1.98 -1.0 -1.61 -1.34 1.13 -1.25 0.38
Spa_g06995 (TIL1)
0.71 -4.22 1.93 -1.61 -3.35 -1.54 -2.35 0.58 -3.58 0.98
Spa_g06999 (DDM2)
0.56 -2.59 1.32 -5.38 -2.23 -3.72 -3.74 1.8 -1.53 0.71
Spa_g07190 (SLD5)
0.94 -4.66 1.74 -2.14 -2.64 -2.25 -2.78 1.11 -1.27 0.48
Spa_g07280 (NF-YC13)
0.26 -6.5 1.37 -4.79 -3.59 -5.02 - 2.08 -2.29 0.69
0.44 -5.66 1.76 -5.32 -4.53 -4.47 -3.28 1.86 -1.76 0.12
0.51 -5.15 2.03 -3.66 -4.97 -3.88 - 1.46 -0.58 -0.22
Spa_g07705 (RPA32B)
0.76 -5.78 1.48 -0.86 -1.87 -1.14 -3.15 0.94 -2.81 1.03
Spa_g08255 (BGAL8)
-0.68 -2.08 1.74 -1.12 -3.22 -1.31 -2.7 2.03 -1.31 -2.4
0.54 -1.15 2.07 -2.93 -3.86 -3.67 -3.94 1.12 -2.69 0.31
0.83 -2.81 1.36 -2.23 -2.18 -2.89 -1.83 1.5 -0.01 -0.27
0.95 - 2.01 - - - - 1.63 -6.07 -0.08
-0.62 -3.65 1.46 -1.01 -2.12 -1.12 -2.08 1.65 -0.66 0.41
0.09 -0.27 0.62 -0.1 -0.94 -0.25 -0.7 0.91 0.2 -0.67
1.16 -10.3 1.66 -6.1 - -7.0 -6.19 1.11 -5.3 1.25
Spa_g09552 (CYP71B10)
-1.43 -1.96 2.12 -1.8 -3.45 -2.29 -5.22 1.53 -0.52 -0.25
Spa_g10040 (TUA6)
0.61 -6.79 1.3 -4.13 -4.1 -3.41 -5.01 1.73 -3.99 1.24
Spa_g10074 (WRKY21)
-0.19 -2.62 1.74 -1.78 -0.94 -1.97 -3.02 1.68 -0.56 -0.91
Spa_g10497 (SMC3)
0.65 -1.6 1.51 -2.1 -2.39 -2.02 -2.34 1.37 -2.17 0.66
Spa_g10521 (CHR5)
0.59 -6.16 1.92 - -6.56 -6.21 -4.87 1.62 -6.07 0.64
Spa_g10680 (CAT2)
0.32 0.31 0.56 -1.28 -1.26 -1.32 -1.24 1.5 -1.39 0.25
Spa_g10681 (CAT2)
0.54 0.33 0.8 -1.13 -1.13 -1.17 -1.21 1.16 -1.61 0.26
Spa_g10729 (PK6)
-0.59 -0.11 0.79 -0.22 -0.58 -0.11 -0.41 0.77 0.13 -0.55
-0.05 -0.94 1.12 -1.67 -0.63 -1.78 -0.6 0.92 0.3 0.38
Spa_g11254 (VIM1)
-0.08 -0.49 0.67 -0.93 -0.39 -0.83 -0.36 0.94 0.09 0.19
0.43 -4.69 1.34 -1.12 -4.66 -1.94 -4.75 1.35 -0.5 1.01
1.49 -3.87 1.31 -4.78 -5.43 -3.43 -6.0 1.6 -3.69 0.45
0.99 -3.6 0.72 -3.96 - -1.38 - 1.85 -0.52 0.63
-1.11 -2.99 2.0 -0.95 -2.13 -1.67 -0.85 1.59 -1.54 -1.14
-0.27 -1.21 1.27 -1.05 -1.59 -0.98 -1.42 1.11 0.69 -0.21
-2.4 - 2.03 - -3.35 -5.29 -1.21 1.36 0.02 0.66
0.3 -5.41 1.79 -2.1 -3.36 -2.12 -5.78 1.56 -1.31 0.43
0.84 -6.57 1.84 -5.29 -3.65 -4.72 -3.62 1.07 -1.95 1.03
-0.71 -0.36 1.23 -1.0 -0.84 -0.81 -0.59 1.13 0.05 -0.43
Spa_g12597 (RAD5)
-1.72 -7.4 2.49 -7.63 -4.15 -3.8 -3.03 1.74 -1.03 -6.12
Spa_g12699 (RAD51)
-0.35 -7.58 2.46 -6.24 - -7.4 -6.02 1.46 -7.64 -0.13
0.31 -4.34 1.6 -1.02 -1.76 -1.05 -2.0 0.86 -1.6 1.0
0.48 -1.21 0.73 -0.51 -2.04 -0.72 -1.9 1.45 0.34 -0.55
Spa_g13463 (OBE2)
0.42 -1.46 0.71 -0.55 -0.7 -0.83 -0.55 0.82 -0.15 0.53
Spa_g13780 (HB21)
-2.74 -0.83 2.26 -2.59 -1.51 -1.8 -1.35 1.58 -1.85 -4.64
0.07 -0.5 0.37 -0.52 -0.67 -2.2 -0.77 1.71 -0.63 -0.14
Spa_g14974 (CPK16)
-0.71 -1.1 1.87 -2.67 -1.7 -3.17 -1.19 1.5 -2.19 0.26
Spa_g15199 (PBRP)
-0.08 -0.76 0.93 -0.4 -0.49 -0.57 -0.23 0.95 0.03 -0.71
0.89 -2.53 1.26 -2.86 -1.95 -2.48 -2.01 1.52 0.09 -0.28
Spa_g16869 (BAS1)
-0.63 0.56 1.01 -1.28 -2.43 -1.77 -2.87 2.06 -2.37 -1.09
-1.48 -5.02 2.12 -2.06 -2.21 -3.27 -2.25 1.63 0.15 -1.7
Spa_g18460 (FC2)
-1.05 -1.75 1.48 -0.81 -1.12 -0.9 -1.03 1.09 -0.2 0.45
-0.83 -0.29 0.76 -1.34 -0.14 -1.18 -0.05 1.16 0.0 -0.03
-1.67 -1.82 1.39 -0.5 -0.1 -0.67 -0.25 1.26 -0.73 -0.57
-1.07 0.27 1.14 -0.42 -2.83 -1.92 -3.94 2.08 -2.31 -1.14
-0.06 -1.68 0.9 -2.04 -0.63 -0.95 -2.82 1.77 -0.01 -0.14
0.7 -4.03 1.62 -1.88 - -1.68 -5.16 1.16 -2.82 1.17
-0.21 -0.96 0.99 -0.48 -0.89 -0.45 -0.42 0.77 -0.37 0.5
-0.27 -0.31 0.64 -1.49 -0.11 -1.6 -0.05 1.25 -0.16 -0.08
-0.45 -1.05 1.48 -0.87 -1.46 -1.04 -1.23 0.91 0.45 -0.1
0.65 -5.09 1.87 -3.87 -3.14 -2.76 -6.13 1.02 -1.22 0.97
-0.78 -3.3 1.94 -1.85 -2.26 -1.98 -3.47 1.5 -1.79 0.6
0.36 -2.31 0.31 -1.48 - -2.36 -1.35 2.12 0.99 -
Spa_g29284 (OMT1)
-0.88 -7.24 2.03 -0.72 -5.99 -2.57 -7.34 1.37 -1.71 0.76
-0.4 -2.01 1.3 -1.29 -0.87 -1.4 -0.84 1.11 0.55 0.02
Spa_g30129 (LBD4)
-0.55 -4.93 1.61 -1.04 -3.01 -1.51 -4.0 1.7 0.57 -1.1
Spa_g30506 (VSR6)
-0.23 -1.46 1.29 -1.15 -0.17 -1.27 -0.25 1.15 0.15 -1.25
0.21 -1.78 1.61 -1.5 -2.3 -1.57 -1.9 1.09 -0.04 0.32
-0.32 -8.23 2.04 -2.43 -8.7 -2.23 -8.46 1.74 -0.19 -1.13
0.02 -0.04 0.72 -0.64 -0.71 -0.25 -0.92 1.03 0.06 -0.59
Spa_g32569 (ATMND1)
0.55 -4.38 2.42 -5.32 - - - 1.11 -2.98 -0.25
-3.3 -4.31 2.15 -0.68 -2.12 -0.41 -1.71 1.72 -3.64 -3.0
-0.13 -1.66 1.79 -2.29 -1.81 -1.59 -1.56 0.97 -0.22 0.43
0.54 -4.22 1.77 -3.51 -3.44 -3.2 -4.63 1.45 -1.09 0.64
Spa_g32821 (HTA3)
0.1 -2.54 1.11 -0.98 -1.31 -1.05 -1.05 1.09 0.23 0.51
Spa_g33087 (DDM2)
0.99 -1.52 1.45 - - - - 1.77 - 0.6
0.38 -4.16 1.53 -4.98 -6.18 -3.2 -2.16 1.43 -1.69 1.24
Spa_g35151 (LINC1)
-0.65 -1.09 1.37 -0.82 -1.81 -1.05 -0.99 1.07 0.75 -0.55
-4.93 -3.74 1.71 -1.39 -0.76 -1.12 -1.06 1.8 -0.23 -1.44
Spa_g36523 (DDM2)
0.44 -2.89 1.6 - -1.49 -4.86 -2.76 1.56 -5.05 0.97
-2.04 -2.15 2.32 -2.21 - - - 1.53 - 0.53
-0.0 -4.45 1.47 -2.9 -2.73 -3.02 -3.66 1.73 -1.66 1.05
Spa_g37319 (ATIM)
0.97 -5.63 1.88 -4.45 -4.1 -4.21 -3.81 0.78 -2.59 1.15
Spa_g38367 (RAD51)
0.8 -4.76 1.78 -3.76 -3.84 -3.15 -2.82 1.5 -3.03 0.51
0.32 - 0.71 - - - -4.07 2.43 -0.14 -0.4
0.62 -6.11 1.47 -3.78 -5.05 -3.76 -3.81 1.89 -3.64 0.72
Spa_g40558 (MIPS2)
0.14 -0.57 1.46 -0.62 -1.25 -0.49 -1.01 0.84 -0.53 -0.51
-0.24 - 1.79 - - - - 1.86 - 1.04
0.41 -1.05 0.81 -0.77 -1.86 -0.65 -1.16 1.34 0.39 -0.65
0.97 -6.62 2.04 -3.6 -5.83 -3.94 -4.39 0.71 -4.37 1.01
Spa_g41237 (ATSMC2)
0.75 -5.81 1.6 -6.01 -7.62 -6.64 -5.99 1.73 -5.5 0.92
0.06 -3.92 0.83 -3.15 -1.71 -1.61 -0.61 2.03 0.28 -1.26
-1.12 -2.88 1.71 -1.22 -0.3 -1.67 -1.69 1.72 -1.14 -0.95
-0.59 -3.4 1.61 -2.32 -2.01 -2.63 -2.95 1.82 -0.64 0.35
-1.5 -1.87 2.15 -3.88 -2.21 -1.31 - 1.51 0.42 -3.65
-2.75 - 2.43 -3.2 -3.13 -3.16 -3.57 1.27 -2.29 0.52
0.15 -2.22 1.95 -3.29 -1.92 -1.23 -3.66 1.6 -2.73 -0.4
-2.91 -2.24 1.58 -1.11 -0.65 -0.68 -0.63 1.44 -0.89 0.05
0.1 - 1.96 - - - - 2.14 -0.68 -
-1.74 -3.04 2.22 -4.1 -1.93 -1.92 - 1.68 -0.14 -2.23
-1.05 -1.1 1.74 -1.75 -0.22 -1.88 -0.45 1.47 -1.25 -1.44
-0.05 0.05 0.68 -0.91 -0.47 -0.7 -0.56 0.87 0.07 -0.04
-0.04 -0.68 0.85 -0.41 -0.7 -0.14 -0.73 0.97 0.26 -0.81
Spa_g46563 (EMB2656)
0.94 -4.08 1.45 -3.17 -4.0 -2.68 -3.74 1.3 -2.83 1.2
-1.58 -1.24 1.84 -1.18 -0.56 -0.25 -1.77 1.04 -0.19 -1.05
-0.35 -0.85 1.94 -1.41 -2.01 -1.29 -1.76 1.36 -0.89 -1.39
Spa_g47575 (LINC2)
-0.25 -1.38 1.4 -1.26 -1.72 -1.1 -1.42 1.01 0.79 -0.26
Spa_g47702 (TRFL2)
-0.39 -1.73 1.62 -0.38 -1.55 -0.74 -1.61 1.01 -1.19 0.44
0.44 -2.53 1.48 -0.86 -0.84 -1.1 -1.43 0.83 -0.93 0.52
-0.16 -0.48 0.62 -0.34 -0.42 -0.43 0.02 0.66 0.15 -0.21
-0.5 - 2.23 -2.46 - -0.77 - 1.67 -1.75 -1.54
-0.17 - 1.88 -4.23 - -3.14 - 2.04 -0.31 -1.6
-1.64 -4.51 2.11 -4.04 -2.98 -3.58 -3.22 1.85 -0.11 -1.33
Spa_g49105 (MS188)
-0.81 -4.7 1.7 -3.17 -4.63 -2.73 -2.58 1.69 -1.77 1.11
-0.22 -0.94 0.84 -0.38 -0.78 -0.14 -0.66 1.52 -0.29 -1.92
0.08 - 1.32 -2.0 -3.01 -1.53 -5.82 2.02 -0.21 -0.33
-0.93 -3.05 2.23 -1.69 -2.24 -2.27 -2.57 1.28 -0.32 -0.94
Spa_g49443 (ATK1)
0.87 -6.0 1.17 -0.62 -4.3 -0.69 -4.26 1.14 -0.17 0.53
-0.35 -0.56 0.8 -1.99 -0.79 -1.82 -0.12 1.4 -0.06 0.21
-0.51 -2.93 1.82 -0.85 -1.36 -0.67 -1.28 0.66 -0.08 0.19
1.65 - 1.91 -3.96 - -3.76 - 1.21 -2.35 -1.14
0.55 -2.26 1.62 -1.33 -1.19 -1.13 -0.84 0.69 -1.22 0.45
- -0.16 2.23 -4.6 -1.23 -1.54 -2.03 1.16 -1.56 -0.36
0.66 - 1.56 - -4.26 - - 2.28 -1.26 -2.84
-3.46 -4.18 2.05 -0.59 -2.04 -0.31 -1.73 1.8 -3.52 -2.97
Spa_g50617 (IQD6)
0.95 - 1.44 -3.53 - -2.99 -6.68 1.64 -2.46 0.87
-0.58 -0.22 0.75 -1.59 -0.36 -1.23 0.14 1.2 0.02 -0.23
0.55 -1.0 0.9 -0.89 -1.67 -0.99 -1.64 1.31 0.37 -0.51
0.19 - 1.0 -0.77 -1.23 -3.16 -1.64 1.94 -0.84 0.02
-2.54 -1.25 2.21 -2.31 -1.89 -2.1 -1.31 1.68 -1.37 -3.57
-1.1 -1.22 1.25 -0.31 -0.45 -0.11 -0.45 0.85 -0.84 0.23
-1.19 -0.28 1.27 -1.31 -1.32 -0.36 -0.18 1.1 0.02 -0.49
1.58 -7.83 2.01 -4.53 -6.87 -4.68 -6.83 0.89 -1.42 -0.6
0.29 -1.03 1.34 -1.53 -0.85 -1.16 -0.39 0.69 -0.15 0.19
Spa_g56321 (KIWI)
1.14 -4.98 1.76 -0.02 - -1.64 - 0.85 -2.1 0.07
0.34 - 1.28 - -1.47 - - 2.21 0.07 -1.87
Spa_g56880 (UGT85A1)
0.86 - 1.44 -0.31 - - - 2.22 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.