Spa_g13021


Description : not classified & original description: none


Gene families : OG0006589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006589_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13021
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Adi_g025087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15038 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g24550 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g11716 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0093.g043217 No alias not classified & original description: CDS=114-1595 0.02 OrthoFinder output from all 47 species
Cba_g22594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.19G077100.1 Ceric.19G077100 not classified & original description: pacid=50576551... 0.07 OrthoFinder output from all 47 species
Dde_g25576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000839001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g31680.1 LOC_Os05g31680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g27807 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10435866g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g00590.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13049 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e026859_P001 Zm00001e026859 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!