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  5. Spa_g12281

Spa_g12281


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0003806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12281

Target Alias Description ECC score Gene Family Method Actions
AT4G10320 No alias tRNA synthetase class I (I, L, M and V) family protein 0.05 OrthoFinder output from all 47 species
Adi_g059090 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Adi_g076912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01566 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g16638 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Als_g01962 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Cre16.g651750 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dcu_g23538 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g09176 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g01677 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010735001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
LOC_Os06g43760.1 LOC_Os06g43760 isoleucine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Lfl_g04993 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
MA_10433439g0010 No alias Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_496893g0010 No alias Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9912g0010 No alias Isoleucine--tRNA ligase, cytoplasmic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g20330.1 No alias isoleucine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Ore_g36476 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03990 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Smo153639 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 OrthoFinder output from all 47 species
Tin_g10622 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e030455_P003 Zm00001e030455 isoleucine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Zm00001e037466_P001 Zm00001e037466 isoleucine-tRNA ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 19 278
IPR002300 aa-tRNA-synth_Ia 316 687
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 743 893
No external refs found!