Spa_g12249


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12249
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36007 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13134 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19862 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23995 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01267.t2 CRR2, Aspi01Gene01267 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24271.t1 Aspi01Gene24271 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27915.t1 Aspi01Gene27915 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65182.t1 OTP86, Aspi01Gene65182 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65777.t1 Aspi01Gene65777 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46044 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G080500.1 CRR22, Ceric.06G080500 not classified & original description: pacid=50618993... 0.03 OrthoFinder output from all 47 species
Dac_g05106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34372 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427854g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Msp_g15863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16061 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18756 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05062 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55770 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.03 OrthoFinder output from all 47 species
Sam_g08926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.03 OrthoFinder output from all 47 species
Smo51483 CRR22 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Tin_g23468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30121 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 276 299
IPR002885 Pentatricopeptide_repeat 503 547
IPR002885 Pentatricopeptide_repeat 302 350
IPR002885 Pentatricopeptide_repeat 100 146
IPR002885 Pentatricopeptide_repeat 604 651
IPR002885 Pentatricopeptide_repeat 200 248
IPR002885 Pentatricopeptide_repeat 403 450
No external refs found!