Spa_g12236 (RSH1, ATRSH1, AT-RSH1)

Aliases : RSH1, ATRSH1, AT-RSH1

Description : ppGpp hydrolase *(RSH1) & original description: none

Gene families : OG0007704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007704_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12236
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AT4G02260	RSH1, ATRSH1, AT-RSH1	RELA/SPOT homolog 1	0.05	OrthoFinder output from all 47 species
Adi_g000749	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g01958	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13069	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene53667.t2	RSH1, ATRSH1,...	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03393	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.08G066100.1	RSH1, ATRSH1,...	ppGpp hydrolase *(RSH1) & original description:...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.58	RSH1, ATRSH1, AT-RSH1	Putative GTP diphosphokinase RSH1, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dac_g23400	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g48904	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os03g22160.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.04	OrthoFinder output from all 47 species
Len_g17577	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g03474	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.09	OrthoFinder output from all 47 species
Msp_g15202	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g01441	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.08	OrthoFinder output from all 47 species
Ore_g41028	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g12213	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g13481	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03956	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g19490	No alias	ppGpp hydrolase *(RSH1) & original description: none	0.08	OrthoFinder output from all 47 species
Solyc09g075390.4.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.04	OrthoFinder output from all 47 species
Solyc09g098580.3.1	RSH1, ATRSH1,...	Putative GTP diphosphokinase RSH1, chloroplastic...	0.04	OrthoFinder output from all 47 species
Tin_g28376	RSH1, ATRSH1, AT-RSH1	ppGpp hydrolase *(RSH1) & original description: none	0.13	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004325	ferrochelatase activity	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006783	heme biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004095	TGS	542	601
IPR007685	RelA_SpoT	359	479

External Links

No external refs found!

Spa_g12236 (RSH1, ATRSH1, AT-RSH1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation