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  5. Spa_g11579

Spa_g11579


Description : not classified & original description: none


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11579

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00155950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g32257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02801.t1 Aspi01Gene02801 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G034600.1 Ceric.02G034600 not classified & original description: pacid=50586050... 0.04 OrthoFinder output from all 47 species
LOC_Os01g38660.1 LOC_Os01g38660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g49020.1 LOC_Os07g49020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g37590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43694 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012968 No alias not classified & original description: CDS=1-1119 0.03 OrthoFinder output from all 47 species
Solyc12g049210.1.1 Solyc12g049210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g29742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 58 102
No external refs found!