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  5. Spa_g08054

Spa_g08054 (RPL24A)


Aliases : RPL24A

Description : component *(eL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08054

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00095150 RPL24A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT2G36620 RPL24A ribosomal protein L24 0.03 OrthoFinder output from all 47 species
AT3G53020 STV1, RPL24, RPL24B Ribosomal protein L24e family protein 0.03 OrthoFinder output from all 47 species
Ala_g20428 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g23672 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g09913 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.27G010000.1 STV1, RPL24,... component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre09.g391097 STV1, RPL24, RPL24B Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g14497 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g45784 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01010601001 RPL24A Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01034676001 RPL24A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59990.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
MA_13787g0010 RPL24A no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14639g0010 STV1, RPL24, RPL24B pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 OrthoFinder output from all 47 species
Mp5g17510.1 RPL24A pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 OrthoFinder output from all 47 species
Pir_g10553 RPL24A component *(eL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c13_10770V3.1 RPL24A, Pp3c13_10770 ribosomal protein L24 0.01 OrthoFinder output from all 47 species
Ppi_g06076 STV1, RPL24, RPL24B component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g04326 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g06964 No alias component *(eL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Solyc09g008800.3.1 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.03 OrthoFinder output from all 47 species
Zm00001e004947_P001 STV1, RPL24,... pri-miRNA recruitment factor (STV1). component RPL24 of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000988 Ribosomal_L24e-rel 69 132
No external refs found!