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  5. Spa_g06988

Spa_g06988 (ATMIN7, BEN1)


Aliases : ATMIN7, BEN1

Description : ARF-GTPase guanyl-nucleotide exchange factor *(BIG) & original description: none


Gene families : OG0001094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06988
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Adi_g019462 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ala_g02716 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ceric.35G045800.1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Dde_g21336 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14260.1 LOC_Os03g14260 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Lfl_g02471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR032629 DCB_dom 107 248
IPR015403 Mon2/Sec7/BIG1-like_HDS 1106 1188
IPR046455 Sec7/BIG1-like_C 1577 1787
IPR000904 Sec7_dom 612 793
IPR032691 Mon2/Sec7/BIG1-like_HUS 359 510
No external refs found!