Spa_g06801


Description : not classified & original description: none


Gene families : OG0001843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06801

Target Alias Description ECC score Gene Family Method Actions
Adi_g010784 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g010785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015212 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g015213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g015214 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g023304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g041366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20928 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0001.g000991 No alias not classified & original description: CDS=384-923 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010308 No alias not classified & original description: CDS=1-894 0.06 OrthoFinder output from all 47 species
Azfi_s0116.g046360 No alias not classified & original description: CDS=83-760 0.03 OrthoFinder output from all 47 species
Ceric.24G060800.1 Ceric.24G060800 not classified & original description: pacid=50629393... 0.04 OrthoFinder output from all 47 species
Dac_g00520 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g12231 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g12192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19308 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g19309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g05778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013292 No alias not classified & original description: CDS=107-649 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013395 No alias not classified & original description: CDS=85-822 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026752 No alias not classified & original description: CDS=152-814 0.04 OrthoFinder output from all 47 species
Sam_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06587 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g06588 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g10901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17439 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g39340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01612 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g10596 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!