Spa_g06353


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06353
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00095700 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g003400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09118.t1 Aspi01Gene09118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19267 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G041200.1 Ceric.15G041200 not classified & original description: pacid=50639654... 0.03 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.04 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033095001 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.03 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.02 OrthoFinder output from all 47 species
Nbi_g03608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g23221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.04 OrthoFinder output from all 47 species
Solyc09g074380.4.1 Solyc09g074380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004140 dephospho-CoA kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 90 215
No external refs found!