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  5. Spa_g06049

Spa_g06049


Description : subunit eta *(CCT7) of CCT chaperonin folding complex & original description: none


Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06049

Target Alias Description ECC score Gene Family Method Actions
AT3G11830 No alias TCP-1/cpn60 chaperonin family protein 0.08 OrthoFinder output from all 47 species
Adi_g113191 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Aev_g01135 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Als_g10726 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Aop_g01325 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014027 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033787 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.05G016500.1 Ceric.05G016500 subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001371.8 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Cre01.g026550 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Dac_g09536 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g14177 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
LOC_Os06g47320.1 LOC_Os06g47320 CCT7 subunit eta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Len_g04756 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Lfl_g17138 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
MA_20110g0010 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Mp7g09680.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Msp_g08578 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Nbi_g00986 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Pp3c15_8230V3.1 Pp3c15_8230 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Sam_g18786 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g27520 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Smo168086 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 OrthoFinder output from all 47 species
Solyc06g065520.3.1 Solyc06g065520 CCT7 subunit eta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Tin_g01076 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e025196_P001 Zm00001e025196 CCT7 subunit eta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 36 527
No external refs found!