Spa_g04230


Description : not classified & original description: none


Gene families : OG0001556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04230

Target Alias Description ECC score Gene Family Method Actions
Adi_g022722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35481.t1 Aspi01Gene35481 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G052300.1 Ceric.28G052300 not classified & original description: pacid=50570866... 0.03 OrthoFinder output from all 47 species
Dac_g11275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15023 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!