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  5. Spa_g04006

Spa_g04006 (PSB27)


Aliases : PSB27

Description : protein involved in PS-II assembly *(Psb27) & original description: none


Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04006

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00251710 PSB27,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G03600 PSB27 photosystem II family protein 0.1 OrthoFinder output from all 47 species
Adi_g017378 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Adi_g017379 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Aob_g03856 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aop_g01610 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene05705.t1 PSB27, Aspi01Gene05705 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G049900.1 PSB27, Ceric.35G049900 protein involved in PS-II assembly *(Psb27) & original... 0.12 OrthoFinder output from all 47 species
Cre05.g243800 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dac_g02601 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g44405 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Dde_g21620 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g19278 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g20883 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030552001 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Gb_23437 PSB27 Psb27 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
LOC_Os03g21560.1 PSB27, LOC_Os03g21560 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Len_g11187 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
MA_388691g0010 PSB27 Psb27 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Mp3g19780.1 PSB27 Psb27 protein involved in PS-II assembly 0.1 OrthoFinder output from all 47 species
Msp_g04977 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.1 OrthoFinder output from all 47 species
Nbi_g03338 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Pir_g09257 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g10971 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Smo77713 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Solyc07g054290.1.1 PSB27, Solyc07g054290 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Spa_g05331 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Spa_g05332 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Tin_g00234 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Zm00001e001572_P001 PSB27, Zm00001e001572 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Zm00001e038249_P001 PSB27, Zm00001e038249 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0010206 photosystem II repair IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 63 189
No external refs found!