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  5. Spa_g03931

Spa_g03931


Description : assembly factor involved in RuBisCo assembly *(BSD2) & original description: none


Gene families : OG0007502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03931

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00065110 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Aev_g06316 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Ala_g06623 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Als_g00356 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.08 OrthoFinder output from all 47 species
Aop_g26060 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Azfi_s0168.g054582 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Dac_g38788 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Dac_g38789 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Dcu_g03433 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Dde_g14872 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Len_g00237 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.12 OrthoFinder output from all 47 species
Msp_g11910 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Msp_g29361 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Nbi_g01616 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Ore_g07584 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Pir_g60370 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Pnu_g00272 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Ppi_g57647 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018366 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Sam_g15087 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.08 OrthoFinder output from all 47 species
Solyc12g009440.2.1 Solyc12g009440 BSD2 assembly factor involved in RuBisCo assembly 0.02 OrthoFinder output from all 47 species
Tin_g09665 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Zm00001e003014_P001 Zm00001e003014 BSD2 assembly factor involved in RuBisCo assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!