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  5. Ore_g45396

Ore_g45396 (FdC2)


Aliases : FdC2

Description : ferredoxin targeted to non-NADP reduction & original description: none


Gene families : OG0007333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g45396

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00044800 FdC2,... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g117987 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Ala_g05506 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene44052.t2 FdC2, Aspi01Gene44052 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037536 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Cba_g09036 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Cre07.g334800 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g14626 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Dcu_g37722 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ehy_g10832 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017981001 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_40918 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g45710.1 FdC2, LOC_Os03g45710 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g05521 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
MA_184421g0010 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g15920.1 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g11679 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Pnu_g00441 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Zm00001e005218_P001 FdC2, Zm00001e005218 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 87 159
No external refs found!