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  5. Ore_g40610

Ore_g40610


Description : not classified & original description: none


Gene families : OG0002648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40610

Target Alias Description ECC score Gene Family Method Actions
AT2G14910 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.02 OrthoFinder output from all 47 species
AT5G14970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g009038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2090.g109127 No alias not classified & original description: CDS=304-1755 0.02 OrthoFinder output from all 47 species
Ceric.19G007500.1 Ceric.19G007500 not classified & original description: pacid=50575409... 0.05 OrthoFinder output from all 47 species
LOC_Os03g41080.1 LOC_Os03g41080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g27436 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo145704 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g03324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005139_P001 Zm00001e005139 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 99 180
No external refs found!