Aliases : MURE, PDE316, ATMURE
Description : cofactor of plastid-encoded RNA polymerase *(PAP11/MURE) & original description: none
Gene families : OG0004194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004194_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g33830 | |
Cluster | HCCA: Cluster_98 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00009p00236210 | MURE, PDE316,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.04 | OrthoFinder output from all 47 species | |
AT1G63680 | MURE, PDE316, ATMURE | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases | 0.03 | OrthoFinder output from all 47 species | |
Als_g27358 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011499 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g69159 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.37G004600.1 | MURE, PDE316,... | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g05922 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01019746001 | MURE, PDE316, ATMURE | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.05 | OrthoFinder output from all 47 species | |
Len_g12297 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.04 | OrthoFinder output from all 47 species | |
MA_961480g0010 | MURE, PDE316, ATMURE | PAP11/MURE cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
Mp6g20740.1 | MURE, PDE316, ATMURE | PAP11/MURE cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g12757 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g64894 | MURE, PDE316, ATMURE | cofactor of plastid-encoded RNA polymerase *(PAP11/MURE)... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c24_18820V3.1 | MURE, PDE316,... | acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases | 0.02 | OrthoFinder output from all 47 species | |
Smo148635 | MURE, PDE316, ATMURE | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e037912_P001 | MURE, PDE316,... | PAP11/MURE cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0009058 | biosynthetic process | IEA | Interproscan |
MF | GO:0016881 | acid-amino acid ligase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006772 | thiamine metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009228 | thiamine biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0017038 | protein import | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034308 | primary alcohol metabolic process | IEP | HCCA |
BP | GO:0034309 | primary alcohol biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | HCCA |
BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
No external refs found! |