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  5. Ore_g29369

Ore_g29369 (HB51, ATHB51, LMI1)


Aliases : HB51, ATHB51, LMI1

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29369
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G69780 ATHB13 Homeobox-leucine zipper protein family 0.02 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 OrthoFinder output from all 47 species
Als_g23746 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32029.t1 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019012001 ATHB40, HB40, HB-5 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01019655001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10210.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Lfl_g23117 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_19453g0040 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_9241385g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Nbi_g06999 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g54343 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g085630.3.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc04g074700.4.1 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc06g053220.3.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Solyc07g062790.1.1 ATHB52, HB52,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e010004_P002 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e022379_P002 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 71 124
No external refs found!