Ore_g29329


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29329

Target Alias Description ECC score Gene Family Method Actions
Adi_g042499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G054300.1 Ceric.15G054300 not classified & original description: pacid=50639834... 0.03 OrthoFinder output from all 47 species
Dac_g01495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37373 No alias Protein FLX-like 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g065630.4.1 Solyc02g065630 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g121500.3.1 Solyc03g121500 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g062110.3.1 Solyc07g062110 Protein FLX-like 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04612 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Spa_g42471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020893_P001 Zm00001e020893 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!