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  5. Ore_g28904

Ore_g28904


Description : component *(GatA) of glutamyl-tRNA-dependent amidotransferase complex & original description: none


Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28904
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00040100 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
AT3G25660 No alias Amidase family protein 0.05 OrthoFinder output from all 47 species
Adi_g055235 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Als_g27327 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Aop_g13372 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0485.g073411 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Cba_g08123 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Cre10.g439400 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dac_g07300 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g32347 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01020788001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55050.1 LOC_Os04g55050 component GatA of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Len_g23600 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Lfl_g08069 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Mp1g01690.1 No alias component GatA of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Msp_g43744 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g18796 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Pnu_g18336 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Ppi_g10248 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.07 OrthoFinder output from all 47 species
Sam_g39506 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g51291 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Smo440512 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Solyc10g007840.3.1 Solyc10g007840 component GatA of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species
Spa_g12039 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e006778_P003 Zm00001e006778 component GatA of glutamyl-tRNA-dependent... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 73 532
No external refs found!