Aliases : ECT5
Description : methylation reader *(ECT) & original description: none
Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g26129 | |
Cluster | HCCA: Cluster_98 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G48110 | ECT7 | evolutionarily conserved C-terminal region 7 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g010480 | ECT2 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g09055 | ECT5 | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g47637 | ECT5 | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0114.g046082 | ECT8 | methylation reader *(ECT) & original description: CDS=188-1819 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.05G060700.1 | ECT5, Ceric.05G060700 | methylation reader *(ECT) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g07823 | ECT8 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017649001 | ECT7 | No description available | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029460001 | ECT5 | No description available | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033395001 | ECT2 | No description available | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g20180.2 | ECT7, LOC_Os03g20180 | methylation reader (ECT) | 0.02 | OrthoFinder output from all 47 species | |
Len_g00742 | ECT5 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05658 | ECT2 | methylation reader *(ECT) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g16648 | ECT8 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_130754g0010 | ECT2 | methylation reader (ECT) | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g10542 | ECT5 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24888 | No alias | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g099090.3.1 | ECT7, Solyc12g099090 | methylation reader (ECT) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g01211 | ECT2 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021575_P001 | ECT5, Zm00001e021575 | methylation reader (ECT) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039003_P004 | ECT2, Zm00001e039003 | methylation reader (ECT) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
CC | GO:0016459 | myosin complex | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007275 | YTH_domain | 428 | 566 |
No external refs found! |