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  5. Ore_g26017

Ore_g26017


Description : not classified & original description: none


Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26017
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00074520 evm_27.TU.AmTr_v1... PsbP domain-containing protein 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.05 OrthoFinder output from all 47 species
Adi_g018578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31777 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g01112 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g01125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0384.g067468 No alias not classified & original description: CDS=106-1002 0.03 OrthoFinder output from all 47 species
Cba_g10334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.35G021700.1 Ceric.35G021700 not classified & original description: pacid=50580848... 0.05 OrthoFinder output from all 47 species
Dac_g00401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04309 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01010018001 No alias PsbP domain-containing protein 4, chloroplastic... 0.08 OrthoFinder output from all 47 species
LOC_Os12g08830.1 LOC_Os12g08830 PsbP domain-containing protein 4, chloroplastic... 0.07 OrthoFinder output from all 47 species
Len_g04660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428945g0010 No alias PsbP domain-containing protein 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g02718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g064670.3.1 Solyc04g064670 PsbP domain-containing protein 4, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 112 255
No external refs found!