Ore_g25318


Description : not classified & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25318

Target Alias Description ECC score Gene Family Method Actions
AT3G13460 ECT2 evolutionarily conserved C-terminal region 2 0.02 OrthoFinder output from all 47 species
AT5G61020 ECT3 evolutionarily conserved C-terminal region 3 0.02 OrthoFinder output from all 47 species
Adi_g041963 ECT6 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061121 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02554 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19226 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0129.g048890 ECT5 methylation reader *(ECT) & original description: CDS=358-1521 0.03 OrthoFinder output from all 47 species
Cba_g04036 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20530 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G070900.1 ECT7, Ceric.02G070900 methylation reader *(ECT) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g23395 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07084 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17655 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g00742 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07815 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16648 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08099 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14936 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16704 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55758 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006035 ECT8 methylation reader *(ECT) & original description: CDS=18-1823 0.02 OrthoFinder output from all 47 species
Spa_g02267 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12619 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46273 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12437 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021575_P001 ECT5, Zm00001e021575 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!