Ore_g25092


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25092

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g003682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56297.t1 Aspi01Gene56297 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72080.t1 Aspi01Gene72080 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.04 OrthoFinder output from all 47 species
Ceric.26G072500.1 Ceric.26G072500 not classified & original description: pacid=50600348... 0.02 OrthoFinder output from all 47 species
Dac_g23136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01027120001 No alias Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.07 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.02 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07995 No alias substrate adaptor of SCF E3 ubiquitin ligase *(PCH) &... 0.02 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g33780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015275 No alias not classified & original description: CDS=1-5475 0.02 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g35286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g095900.4.1 Solyc01g095900 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016102_P002 Zm00001e016102 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Zm00001e033372_P001 Zm00001e033372 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 796 938
IPR028275 CLU_N 48 118
No external refs found!