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  5. Ore_g20691

Ore_g20691 (APRL6, ATAPRL6)


Aliases : APRL6, ATAPRL6

Description : not classified & original description: none


Gene families : OG0001701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20691

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00202780 APRL4, ATAPRL4,... 5-adenylylsulfate reductase-like 3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Cba_g23544 APRL6, ATAPRL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g51850.1 APRL4, ATAPRL4,... 5-adenylylsulfate reductase-like 3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59170.1 ATAPRL7, APRL7,... 5-adenylylsulfate reductase-like 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os08g31814.1 APRL4, ATAPRL4,... 5-adenylylsulfate reductase-like 4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Sam_g09255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006070_P003 APRL5, ATAPRL5,... 5-adenylylsulfate reductase-like 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e023858_P001 APRL4, ATAPRL4,... 5-adenylylsulfate reductase-like 3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 95 173
No external refs found!